Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit alpha | SDE_RS00075 | Not Available | - | 15577 - 16533 | 36375.3 |
| lysophospholipid acyltransferase family protein | SDE_RS00080 | Not Available | + | 16846 - 17733 | 32647.8 |
| hypothetical protein | SDE_RS00085 | Not Available | + | 17798 - 18328 | 19522.6 |
| tigr00645 family protein | SDE_RS00090 | Not Available | + | 18822 - 19310 | 18155.0 |
| trkh family potassium uptake protein | SDE_RS00095 | Not Available | - | 19328 - 20776 | 52877.0 |
| trk system potassium transporter trka | SDE_RS00100 | Not Available | - | 20815 - 22248 | 52492.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SDE_RS00105 | Not Available | - | 22285 - 23622 | 49646.5 |
| methionyl-trna formyltransferase | SDE_RS00110 | Not Available | - | 23650 - 24618 | 34203.4 |
| peptide deformylase | SDE_RS00115 | Not Available | - | 24696 - 25214 | 19706.9 |
| lysm peptidoglycan-binding domain-containing protein | SDE_RS00120 | Not Available | + | 25495 - 26553 | 39076.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.