Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | SDE_RS00785 | Not Available | - | 188819 - 190087 | 47703.2 |
| hypothetical protein | SDE_RS00790 | Not Available | - | 190107 - 190535 | 16254.7 |
| gmc oxidoreductase | SDE_RS00795 | Not Available | - | 190549 - 191976 | 53169.9 |
| lipopolysaccharide biosynthesis protein | SDE_RS00800 | Not Available | - | 191987 - 193438 | 52688.4 |
| polysaccharide deacetylase family protein | SDE_RS00805 | Not Available | - | 193465 - 194481 | 38101.5 |
| glycosyltransferase | SDE_RS00810 | Not Available | - | 194498 - 195724 | 45962.6 |
| acyltransferase | SDE_RS00815 | Not Available | - | 195752 - 196300 | 20090.2 |
| gnat family n-acetyltransferase | SDE_RS00820 | Not Available | - | 196328 - 197476 | 43806.7 |
| glycosyltransferase family 2 protein | SDE_RS00825 | Not Available | + | 197824 - 198963 | 42361.4 |
| degt/dnrj/eryc1/strs family aminotransferase | SDE_RS00830 | Not Available | + | 198963 - 200090 | 40427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.