Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xrta/pep-cterm system exopolysaccharide export protein | SDE_RS00685 | Not Available | + | 164023 - 164550 | 19012.8 |
| xrta system polysaccharide chain length determinant | SDE_RS00690 | Not Available | + | 164554 - 166077 | 57295.6 |
| hypothetical protein | SDE_RS00695 | Not Available | + | 166097 - 167377 | 47610.6 |
| glycosyltransferase family 2 protein | SDE_RS00700 | Not Available | + | 167440 - 168399 | 36205.6 |
| gtra family protein | SDE_RS00705 | Not Available | + | 168405 - 168776 | 13572.0 |
| polysaccharide lyase | SDE_RS00710 | Not Available | - | 168838 - 169752 | 33959.1 |
| femab family xrta/pep-cterm system-associated protein | SDE_RS00715 | Not Available | - | 169866 - 171281 | 53635.6 |
| xrta system polysaccharide deacetylase | SDE_RS00720 | Not Available | - | 171293 - 172180 | 34264.6 |
| exosortase | SDE_RS00725 | Not Available | + | 172389 - 173915 | 55971.7 |
| sulfotransferase family protein | SDE_RS00730 | Not Available | + | 173927 - 174736 | 31194.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.