Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marine proteobacterial sortase target protein | SDE_RS00635 | Not Available | + | 152795 - 155086 | 83718.0 |
| class gn sortase | SDE_RS00640 | Not Available | + | 155065 - 155820 | 27733.1 |
| sdr family oxidoreductase | SDE_RS00645 | Not Available | + | 156003 - 156662 | 22865.5 |
| zinc transporter zntb | SDE_RS00650 | Not Available | + | 156757 - 157725 | 36134.8 |
| class i sam-dependent rna methyltransferase | SDE_RS00655 | Not Available | + | 157733 - 158959 | 44509.1 |
| hypothetical protein | SDE_RS21020 | Not Available | - | 159047 - 159613 | 22433.6 |
| tsup family transporter | SDE_RS00665 | Not Available | - | 159734 - 160510 | 28772.2 |
| ferrochelatase | SDE_RS00670 | Not Available | - | 160510 - 161625 | 42048.0 |
| hypothetical protein | SDE_RS00675 | Not Available | - | 161842 - 162048 | 7468.8 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | SDE_RS00680 | Not Available | + | 162437 - 163846 | 53284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.