Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperone napd | SDE_RS00425 | Not Available | + | 104132 - 104416 | 10682.7 |
| nitrate reductase catalytic subunit napa | SDE_RS00430 | Not Available | + | 104416 - 106911 | 93169.0 |
| nitrate reductase cytochrome c-type subunit | SDE_RS00435 | Not Available | + | 106915 - 107433 | 19470.2 |
| cytochrome c3 family protein | SDE_RS00440 | Not Available | + | 107445 - 108044 | 22709.1 |
| pentapeptide repeat-containing protein | SDE_RS00445 | Not Available | + | 108365 - 110155 | 66219.0 |
| oxygenase mpab family protein | SDE_RS00450 | Not Available | - | 110214 - 110867 | 25325.8 |
| vanz family protein | SDE_RS00455 | Not Available | + | 111021 - 111425 | 15044.8 |
| peroxiredoxin family protein | SDE_RS00460 | Not Available | - | 111429 - 111986 | 20481.7 |
| sdr family oxidoreductase | SDE_RS00465 | Not Available | - | 112021 - 112779 | 27502.9 |
| type ii toxin-antitoxin system hipa family toxin | SDE_RS00470 | Not Available | - | 112839 - 114137 | 48212.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.