Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | SDE_RS03815 | Not Available | - | 925981 - 927822 | 69939.8 |
| dna primase | SDE_RS03820 | Not Available | - | 927937 - 929907 | 73364.9 |
| gatb/yqey domain-containing protein | SDE_RS03825 | Not Available | - | 930006 - 930455 | 16134.6 |
| 30s ribosomal protein s21 | SDE_RS03830 | Not Available | - | 930612 - 930827 | 8518.47 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | SDE_RS03835 | Not Available | + | 931225 - 932250 | 36304.8 |
| tonb-dependent receptor plug domain-containing protein | SDE_RS03840 | Not Available | + | 932596 - 934518 | 68490.4 |
| thua domain-containing protein | SDE_RS03845 | Not Available | + | 934617 - 937055 | 89631.9 |
| dihydroneopterin aldolase | SDE_RS03850 | Not Available | + | 937254 - 937607 | 13165.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | SDE_RS03855 | Not Available | + | 937609 - 938103 | 18279.8 |
| hypothetical protein | SDE_RS03860 | Not Available | + | 938274 - 938825 | 20320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.