Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | SDE_RS03510 | Not Available | - | 834206 - 835099 | 33792.7 |
| ferredoxin--nadp reductase | SDE_RS03515 | Not Available | + | 835266 - 836042 | 28957.6 |
| sapc family protein | SDE_RS03520 | Not Available | + | 836334 - 837053 | 27061.0 |
| eal domain-containing protein | SDE_RS21115 | Not Available | + | 837361 - 839928 | 95716.4 |
| nad-dependent malic enzyme | SDE_RS03530 | Not Available | - | 839940 - 841547 | 58803.5 |
| pas domain s-box protein | SDE_RS03535 | Not Available | + | 841941 - 844673 | 103676.0 |
| response regulator | SDE_RS03540 | Not Available | + | 844767 - 845201 | 16109.2 |
| diguanylate cyclase response regulator | SDE_RS03545 | Not Available | + | 845224 - 846147 | 34294.9 |
| dps family protein | SDE_RS03550 | Not Available | - | 846183 - 846650 | 17622.1 |
| pep-cterm sorting domain-containing protein | SDE_RS03555 | Not Available | - | 846867 - 847589 | 25409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.