Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SDE_RS02930 | Not Available | + | 662805 - 663146 | 12382.0 |
| m48 family metallopeptidase | SDE_RS02935 | Not Available | + | 663197 - 663907 | 26964.4 |
| 5-oxoprolinase/urea amidolyase family protein | SDE_RS21760 | Not Available | - | 663933 - 665582 | 60483.4 |
| 5-oxoprolinase subunit pxpa | SDE_RS02945 | Not Available | - | 665582 - 666313 | 26159.4 |
| hypothetical protein | SDE_RS02950 | Not Available | - | 666338 - 666562 | 8076.14 |
| d-aminoacyl-trna deacylase | SDE_RS02955 | Not Available | - | 666796 - 667233 | 15590.0 |
| beta-propeller domain-containing protein | SDE_RS02960 | Not Available | - | 667338 - 669449 | 75938.6 |
| mipa/ompv family protein | SDE_RS02965 | Not Available | + | 669844 - 670827 | 35932.3 |
| duf3019 domain-containing protein | SDE_RS02970 | Not Available | + | 670829 - 671251 | 16050.2 |
| winged helix-turn-helix domain-containing protein | SDE_RS02975 | Not Available | + | 671253 - 671942 | 25779.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.