Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | SDE_RS02880 | Not Available | - | 654396 - 654752 | 13249.5 |
| yajq family cyclic di-gmp-binding protein | SDE_RS02885 | Not Available | + | 655180 - 655662 | 18078.4 |
| zinc ribbon-containing protein | SDE_RS02890 | Not Available | - | 655674 - 656183 | 18962.3 |
| class i sam-dependent methyltransferase | SDE_RS02895 | Not Available | + | 656369 - 657133 | 27794.4 |
| peptidylprolyl isomerase | SDE_RS02900 | Not Available | - | 657248 - 657733 | 17621.0 |
| mate family efflux transporter | SDE_RS02905 | Not Available | + | 657878 - 659260 | 49484.3 |
| pep-cterm sorting domain-containing protein | SDE_RS23000 | Not Available | + | 659462 - 660091 | 23114.0 |
| hypothetical protein | SDE_RS02915 | Not Available | + | 660372 - 660896 | 18836.9 |
| transporter | SDE_RS02920 | Not Available | + | 661006 - 662073 | 39052.0 |
| winged helix-turn-helix transcriptional regulator | SDE_RS02925 | Not Available | - | 662150 - 662647 | 19118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.