Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SDE_RS02630 | Not Available | - | 595420 - 596454 | 39205.3 |
| class i sam-dependent methyltransferase | SDE_RS02635 | Not Available | - | 596464 - 597186 | 27723.3 |
| glycosyltransferase family 4 protein | SDE_RS02640 | Not Available | - | 597173 - 598588 | 51979.5 |
| thioredoxin family protein | SDE_RS02645 | Not Available | - | 598656 - 599186 | 19633.8 |
| imidazoleglycerol-phosphate dehydratase hisb | SDE_RS02650 | Not Available | + | 599325 - 599918 | 22037.3 |
| imidazole glycerol phosphate synthase subunit hish | SDE_RS02655 | Not Available | + | 600021 - 600698 | 24733.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | SDE_RS02660 | Not Available | + | 600760 - 601491 | 25636.8 |
| imidazole glycerol phosphate synthase subunit hisf | SDE_RS02665 | Not Available | + | 601553 - 602326 | 27353.7 |
| duf6316 family protein | SDE_RS02670 | Not Available | - | 602442 - 602666 | 8352.63 |
| divergent polysaccharide deacetylase family protein | SDE_RS21085 | Not Available | - | 603064 - 604212 | 42093.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.