Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | SDE_RS00125 | Not Available | + | 26731 - 27873 | 40995.4 |
| l-threonylcarbamoyladenylate synthase | SDE_RS00130 | Not Available | + | 28140 - 28715 | 20882.5 |
| oxygen-dependent coproporphyrinogen oxidase | SDE_RS00135 | Not Available | + | 28757 - 29668 | 34619.3 |
| shikimate dehydrogenase | SDE_RS00140 | Not Available | + | 29694 - 30530 | 29276.9 |
| retropepsin-like aspartic protease | SDE_RS00145 | Not Available | + | 30470 - 31798 | 49011.1 |
| ceramidase domain-containing protein | SDE_RS00150 | Not Available | + | 31895 - 32539 | 24059.1 |
| simpl domain-containing protein | SDE_RS00155 | Not Available | - | 32579 - 33349 | 28201.6 |
| gamma carbonic anhydrase family protein | SDE_RS00160 | Not Available | - | 33407 - 33952 | 19205.0 |
| m3 family metallopeptidase | SDE_RS00165 | Not Available | + | 34108 - 36165 | 76798.6 |
| yhev family putative zinc ribbon protein | SDE_RS00170 | Not Available | + | 36171 - 36398 | 8666.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.