Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | SDE_RS19855 | Not Available | + | 4799721 - 4801187 | 53398.2 |
| oligosaccharide flippase family protein | SDE_RS19860 | Not Available | + | 4801372 - 4802634 | 45946.6 |
| glycosyltransferase family 2 protein | SDE_RS19865 | Not Available | + | 4802631 - 4803656 | 38510.2 |
| sensor histidine kinase | SDE_RS19870 | Not Available | - | 4803692 - 4804618 | 33955.5 |
| heme no-binding domain-containing protein | SDE_RS19875 | Not Available | - | 4804615 - 4805157 | 19878.0 |
| hd domain-containing phosphohydrolase | SDE_RS19880 | Not Available | - | 4805169 - 4806488 | 49087.4 |
| hypothetical protein | SDE_RS19885 | Not Available | - | 4806515 - 4807126 | 21251.0 |
| lruc domain-containing protein | SDE_RS19890 | Not Available | - | 4807188 - 4808837 | 61553.4 |
| helix-turn-helix domain-containing protein | SDE_RS19895 | Not Available | + | 4809169 - 4810302 | 43513.8 |
| atp-binding protein | SDE_RS21660 | Not Available | + | 4810744 - 4812582 | 68359.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.