Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | SDE_RS19800 | Not Available | + | 4787218 - 4789368 | 78878.7 |
| glycosyltransferase family 2 protein | SDE_RS19805 | Not Available | - | 4789454 - 4790407 | 35329.9 |
| polysaccharide pyruvyl transferase family protein | SDE_RS19810 | Not Available | - | 4790409 - 4791488 | 38945.9 |
| o-antigen ligase family protein | SDE_RS19815 | Not Available | - | 4791501 - 4792790 | 47006.3 |
| gumc family protein | SDE_RS19820 | Not Available | - | 4792745 - 4794142 | 51929.4 |
| polysaccharide biosynthesis/export family protein | SDE_RS19825 | Not Available | - | 4794160 - 4795461 | 46661.6 |
| hypothetical protein | SDE_RS19835 | Not Available | + | 4795953 - 4796351 | 15101.8 |
| sugar transferase | SDE_RS19840 | Not Available | - | 4796478 - 4797158 | 25347.1 |
| wecb/taga/cpsf family glycosyltransferase | SDE_RS19845 | Not Available | - | 4797422 - 4798684 | 46906.3 |
| hypothetical protein | SDE_RS19850 | Not Available | - | 4798889 - 4799617 | 27915.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.