Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein b | SDE_RS18735 | Not Available | + | 4545585 - 4546085 | 17580.1 |
| sigma d regulator | SDE_RS18740 | Not Available | + | 4546217 - 4546681 | 17721.7 |
| wd40 repeat domain-containing protein | SDE_RS18745 | Not Available | + | 4546841 - 4547827 | 36221.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SDE_RS18750 | Not Available | - | 4547916 - 4548647 | 26076.1 |
| hypothetical protein | SDE_RS22755 | Not Available | + | 4549071 - 4550075 | 33178.4 |
| tigr02444 family protein | SDE_RS18760 | Not Available | - | 4550173 - 4550670 | 18812.8 |
| ompa family protein | SDE_RS18765 | Not Available | - | 4550837 - 4551967 | 39879.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | SDE_RS18770 | Not Available | - | 4552221 - 4552910 | 25759.8 |
| duf423 domain-containing protein | SDE_RS18775 | Not Available | - | 4552936 - 4553307 | 12699.2 |
| rna polymerase sigma factor rpoh | SDE_RS18780 | Not Available | - | 4553419 - 4554273 | 32254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.