Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | SDE_RS18685 | Not Available | - | 4534966 - 4535340 | 14173.4 |
| type ii secretion system minor pseudopilin gsph | SDE_RS18690 | Not Available | - | 4535379 - 4535942 | 21705.0 |
| type ii secretion system major pseudopilin gspg | SDE_RS18695 | Not Available | - | 4535967 - 4536407 | 16018.1 |
| type ii secretion system inner membrane protein gspf | SDE_RS18700 | Not Available | - | 4536478 - 4537713 | 45016.8 |
| type ii secretion system atpase gspe | SDE_RS18705 | Not Available | - | 4537735 - 4539219 | 54272.5 |
| type ii secretion system secretin gspd | SDE_RS18710 | Not Available | - | 4539252 - 4541252 | 71630.4 |
| type ii secretion system protein gspc | SDE_RS18715 | Not Available | - | 4541255 - 4542226 | 34906.7 |
| hypothetical protein | SDE_RS18720 | Not Available | + | 4542644 - 4543132 | 17917.3 |
| glutamate--cysteine ligase | SDE_RS18725 | Not Available | + | 4543262 - 4544854 | 60268.7 |
| flagellar basal body-associated flil family protein | SDE_RS18730 | Not Available | - | 4544914 - 4545399 | 17524.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.