Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SDE_RS18635 | Not Available | - | 4523384 - 4524052 | 24665.4 |
| tetratricopeptide repeat protein | SDE_RS18640 | Not Available | - | 4524039 - 4526912 | 108426.0 |
| tetratricopeptide repeat protein | SDE_RS18645 | Not Available | - | 4526909 - 4528783 | 71411.5 |
| arac family transcriptional regulator | SDE_RS18650 | Not Available | - | 4528771 - 4529409 | 23478.0 |
| fad:protein fmn transferase | SDE_RS18655 | Not Available | - | 4529593 - 4530603 | 36949.0 |
| type ii secretion system protein n | SDE_RS18660 | Not Available | - | 4530745 - 4531515 | 27163.8 |
| type ii secretion system protein m | SDE_RS18665 | Not Available | - | 4531535 - 4532023 | 17887.4 |
| type ii secretion system protein gspl | SDE_RS18670 | Not Available | - | 4532020 - 4533255 | 45848.8 |
| type ii secretion system minor pseudopilin gspk | SDE_RS18675 | Not Available | - | 4533269 - 4534333 | 39072.7 |
| type ii secretion system minor pseudopilin gspj | SDE_RS18680 | Not Available | - | 4534335 - 4534973 | 24307.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.