Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 1 protein | SDE_RS18035 | Not Available | + | 4390043 - 4391827 | 63314.3 |
| hypothetical protein | SDE_RS18040 | Not Available | + | 4392024 - 4393031 | 35683.4 |
| gtp cyclohydrolase ii | SDE_RS18045 | Not Available | - | 4393162 - 4393764 | 22202.8 |
| tigr02281 family clan aa aspartic protease | SDE_RS18050 | Not Available | - | 4393776 - 4394447 | 23953.3 |
| phosphatidylglycerophosphatase a | SDE_RS18055 | Not Available | - | 4394444 - 4394965 | 19161.2 |
| thiamine-phosphate kinase | SDE_RS18060 | Not Available | - | 4394958 - 4395962 | 35452.2 |
| transcription antitermination factor nusb | SDE_RS18065 | Not Available | - | 4395974 - 4396426 | 16952.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | SDE_RS18070 | Not Available | - | 4396470 - 4396937 | 16452.8 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | SDE_RS18075 | Not Available | - | 4396972 - 4398084 | 41292.6 |
| riboflavin synthase | SDE_RS18080 | Not Available | - | 4398109 - 4398771 | 23696.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.