Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | SDE_RS01720 | Not Available | - | 406295 - 407647 | 49541.8 |
| sigma-54-dependent transcriptional regulator | SDE_RS01725 | Not Available | - | 407637 - 409127 | 55076.9 |
| efflux rnd transporter periplasmic adaptor subunit | SDE_RS01730 | Not Available | + | 409270 - 410574 | 47943.0 |
| abc transporter atp-binding protein | SDE_RS01735 | Not Available | + | 410621 - 411301 | 24788.9 |
| abc transporter permease | SDE_RS01740 | Not Available | + | 411311 - 413818 | 92499.5 |
| rna ligase rtcb family protein | SDE_RS01745 | Not Available | + | 414273 - 415505 | 44689.8 |
| peptide chain release factor h | SDE_RS01750 | Not Available | + | 415508 - 416254 | 28160.8 |
| transposase | SDE_RS01760 | Not Available | + | 416748 - 417725 | 37059.7 |
| immunity protein yezg family protein | SDE_RS01765 | Not Available | - | 418075 - 418539 | 17880.5 |
| dna/rna non-specific endonuclease | SDE_RS21750 | Not Available | - | 418552 - 419952 | 51167.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.