Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SDE_RS17580 | Not Available | - | 4288575 - 4289942 | 49264.7 |
| fist signal transduction protein | SDE_RS17585 | Not Available | + | 4290249 - 4291382 | 40351.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SDE_RS17590 | Not Available | + | 4291382 - 4293232 | 69231.0 |
| inorganic diphosphatase | SDE_RS17595 | Not Available | + | 4293307 - 4293843 | 19666.6 |
| hypothetical protein | SDE_RS17600 | Not Available | - | 4293903 - 4294652 | 25603.7 |
| hypothetical protein | SDE_RS21580 | Not Available | + | 4295000 - 4295323 | 12007.1 |
| had family hydrolase | SDE_RS17610 | Not Available | - | 4295362 - 4295988 | 22591.2 |
| m15 family metallopeptidase | SDE_RS17615 | Not Available | - | 4295998 - 4296657 | 24841.3 |
| tfox/sxy family protein | SDE_RS17620 | Not Available | + | 4297215 - 4297493 | 10004.0 |
| rieske (2fe-2s) protein | SDE_RS17625 | Not Available | + | 4297632 - 4297946 | 11486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.