Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine zipper 2tm domain-containing protein | SDE_RS17530 | Not Available | + | 4279257 - 4279814 | 20497.4 |
| pepsy domain-containing protein | SDE_RS23140 | Not Available | + | 4279945 - 4280307 | 12898.8 |
| response regulator transcription factor | SDE_RS17540 | Not Available | + | 4280331 - 4281008 | 25208.1 |
| atp-binding protein | SDE_RS17545 | Not Available | + | 4281093 - 4282463 | 50759.5 |
| vanz family protein | SDE_RS17550 | Not Available | + | 4282478 - 4282855 | 13950.5 |
| gfa family protein | SDE_RS17555 | Not Available | - | 4282920 - 4283309 | 14151.9 |
| efflux rnd transporter permease subunit | SDE_RS17560 | Not Available | - | 4283306 - 4285924 | 97342.3 |
| selt/selw/selh family protein | SDE_RS17565 | Not Available | - | 4286252 - 4286572 | 12251.5 |
| fha domain-containing protein | SDE_RS17570 | Not Available | + | 4286986 - 4287861 | 31817.1 |
| ubix family flavin prenyltransferase | SDE_RS17575 | Not Available | - | 4287950 - 4288582 | 22401.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.