Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SDE_RS17480 | Not Available | - | 4269232 - 4271091 | 69263.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SDE_RS17485 | Not Available | - | 4271107 - 4271574 | 17332.0 |
| ribosome silencing factor | SDE_RS17490 | Not Available | - | 4271617 - 4271961 | 12488.8 |
| nicotinate-nucleotide adenylyltransferase | SDE_RS17495 | Not Available | - | 4271991 - 4272653 | 24417.3 |
| glutamate-5-semialdehyde dehydrogenase | SDE_RS17500 | Not Available | - | 4272678 - 4273946 | 44988.9 |
| alpha-l-glutamate ligase-like protein | SDE_RS17505 | Not Available | - | 4274048 - 4275052 | 36310.6 |
| inactive transglutaminase family protein | SDE_RS17510 | Not Available | - | 4275054 - 4276607 | 57847.3 |
| atp-dependent zinc protease | SDE_RS17515 | Not Available | - | 4276616 - 4277413 | 29798.4 |
| had family hydrolase | SDE_RS17520 | Not Available | + | 4277571 - 4278236 | 24112.6 |
| cpbp family intramembrane glutamic endopeptidase | SDE_RS21570 | Not Available | - | 4278257 - 4279153 | 33662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.