Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | SDE_RS17430 | Not Available | - | 4258185 - 4259624 | 52566.7 |
| tonb-dependent receptor | SDE_RS17435 | Not Available | - | 4259729 - 4261951 | 81811.6 |
| gnat family n-acetyltransferase | SDE_RS17440 | Not Available | - | 4262085 - 4262612 | 20140.2 |
| lipoyl synthase | SDE_RS17445 | Not Available | - | 4262687 - 4263676 | 37211.8 |
| lipoyl(octanoyl) transferase lipb | SDE_RS17450 | Not Available | - | 4263761 - 4264411 | 23530.5 |
| ybed family protein | SDE_RS17455 | Not Available | - | 4264498 - 4264770 | 10108.2 |
| d-alanyl-d-alanine carboxypeptidase family protein | SDE_RS17460 | Not Available | - | 4264763 - 4265932 | 42484.3 |
| septal ring lytic transglycosylase rlpa family protein | SDE_RS17465 | Not Available | - | 4266066 - 4266974 | 33495.1 |
| lytic murein transglycosylase b | SDE_RS17470 | Not Available | - | 4267002 - 4268027 | 38168.2 |
| rod shape-determining protein roda | SDE_RS17475 | Not Available | - | 4268086 - 4269231 | 41729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.