Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| family 20 glycosylhydrolase | SDE_RS17120 | Not Available | - | 4172806 - 4175475 | 98404.8 |
| polysaccharide lyase family 7 protein | SDE_RS17125 | Not Available | + | 4176251 - 4177909 | 58458.8 |
| prolyl hydroxylase family protein | SDE_RS17130 | Not Available | + | 4178278 - 4179714 | 54465.4 |
| polysaccharide lyase 6 family protein | SDE_RS17140 | Not Available | - | 4180019 - 4181596 | 57384.8 |
| polysaccharide lyase 6 family protein | SDE_RS17145 | Not Available | - | 4181715 - 4184393 | 93600.9 |
| transporter substrate-binding domain-containing protein | SDE_RS17150 | Not Available | - | 4184499 - 4185350 | 32179.3 |
| triose-phosphate isomerase | SDE_RS17155 | Not Available | - | 4185784 - 4186539 | 25970.7 |
| fructose-bisphosphatase class iii | SDE_RS17160 | Not Available | - | 4186558 - 4188306 | 65589.0 |
| class ii fructose-bisphosphate aldolase | SDE_RS17165 | Not Available | - | 4188375 - 4189472 | 39910.8 |
| sugar kinase | SDE_RS17170 | Not Available | - | 4189686 - 4190624 | 34764.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.