Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SDE_RS17020 | Not Available | + | 4151340 - 4153115 | 65710.4 |
| lipoprotein insertase outer membrane protein lolb | SDE_RS17025 | Not Available | + | 4153099 - 4153728 | 23602.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | SDE_RS22100 | Not Available | + | 4153773 - 4154639 | 31106.3 |
| Trna-gln | Not Available | Not Available | + | 4154630 - 4154704 | Not Available |
| ribose-phosphate pyrophosphokinase | SDE_RS17040 | Not Available | + | 4154782 - 4155723 | 33997.3 |
| 50s ribosomal protein l25/general stress protein ctc | SDE_RS17045 | Not Available | + | 4155881 - 4156513 | 23017.3 |
| aminoacyl-trna hydrolase | SDE_RS17050 | Not Available | + | 4156606 - 4157199 | 21517.8 |
| redox-regulated atpase ychf | SDE_RS17055 | Not Available | + | 4157210 - 4158301 | 39444.5 |
| Trna-met | Not Available | Not Available | + | 4158504 - 4158580 | Not Available |
| carbohydrate-binding protein | SDE_RS21560 | Not Available | - | 4159173 - 4160618 | 52413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.