Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | SDE_RS01620 | Not Available | - | 376962 - 378335 | 50837.8 |
| adop family duplicated permease | SDE_RS01625 | Not Available | - | 378394 - 380826 | 88644.5 |
| abc transporter atp-binding protein | SDE_RS01630 | Not Available | - | 380837 - 381550 | 25853.1 |
| efflux rnd transporter periplasmic adaptor subunit | SDE_RS01635 | Not Available | - | 381566 - 382816 | 46254.6 |
| duf418 domain-containing protein | SDE_RS01640 | Not Available | - | 383067 - 384299 | 46240.5 |
| tigr02281 family clan aa aspartic protease | SDE_RS01645 | Not Available | + | 384631 - 385155 | 19018.0 |
| duf6635 family protein | SDE_RS01650 | Not Available | + | 385179 - 386141 | 35527.6 |
| pilz domain-containing protein | SDE_RS01655 | Not Available | + | 386252 - 386518 | 9636.75 |
| carbohydrate-binding module family 20 domain-containing protein | SDE_RS01660 | Not Available | + | 387021 - 388955 | 71012.0 |
| multicopper oxidase family protein | SDE_RS01665 | Not Available | + | 389554 - 391263 | 63334.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.