Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | SDE_RS01265 | Not Available | - | 297194 - 298438 | 44974.7 |
| lps translocon maturation chaperone lptm | SDE_RS21740 | Not Available | - | 298536 - 298709 | 6008.42 |
| cobyric acid synthase | SDE_RS01270 | Not Available | - | 298794 - 300251 | 52496.9 |
| m64 family metallopeptidase | SDE_RS01275 | Not Available | - | 300350 - 302533 | 81436.8 |
| carbohydrate-binding protein | SDE_RS01285 | Not Available | + | 303641 - 305686 | 72461.9 |
| hypothetical protein | SDE_RS01290 | Not Available | + | 305889 - 306917 | 37463.6 |
| glycoside hydrolase family 3 protein | SDE_RS01300 | Not Available | - | 307565 - 310153 | 92944.0 |
| mechanosensitive ion channel family protein | SDE_RS01305 | Not Available | + | 310589 - 311446 | 30416.2 |
| hypothetical protein | SDE_RS01310 | Not Available | - | 311475 - 311912 | 16572.9 |
| class i sam-dependent dna methyltransferase | SDE_RS01315 | Not Available | - | 312012 - 312758 | 27643.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.