Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ured | SDE_RS01165 | Not Available | + | 279049 - 279936 | 32661.2 |
| urease subunit gamma | SDE_RS01170 | Not Available | + | 280240 - 280542 | 11055.5 |
| urease subunit beta | SDE_RS01175 | Not Available | + | 280559 - 280864 | 11398.5 |
| urease subunit alpha | SDE_RS01180 | Not Available | + | 280866 - 282572 | 60862.6 |
| urease accessory protein uree | SDE_RS01185 | Not Available | + | 282846 - 283352 | 18673.9 |
| urease accessory protein uref | SDE_RS01190 | Not Available | + | 283384 - 284049 | 24597.7 |
| urease accessory protein ureg | SDE_RS01195 | Not Available | + | 284061 - 284684 | 22184.9 |
| transport-associated protein | SDE_RS01200 | Not Available | + | 284692 - 285318 | 21645.0 |
| urea abc transporter substrate-binding protein | SDE_RS01205 | Not Available | + | 285673 - 286971 | 47333.3 |
| urea abc transporter permease subunit urtb | SDE_RS01210 | Not Available | + | 287126 - 288739 | 58479.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.