Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SDE_RS00475 | Not Available | - | 114131 - 114499 | 13877.7 |
| duf6768 family protein | SDE_RS00480 | Not Available | - | 114662 - 115042 | 14982.6 |
| rna polymerase sigma factor | SDE_RS00485 | Not Available | - | 115035 - 115595 | 21365.5 |
| wadjet anti-phage system protein jeta family protein | SDE_RS00490 | Not Available | + | 115723 - 117177 | 56186.0 |
| duf4194 domain-containing protein | SDE_RS22980 | Not Available | + | 117170 - 118528 | 48229.5 |
| atp-binding protein | SDE_RS00500 | Not Available | + | 118528 - 122172 | 137834.0 |
| duf2220 family protein | SDE_RS00505 | Not Available | + | 122243 - 123493 | 47991.9 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SDE_RS00510 | Not Available | - | 123824 - 125356 | 55277.0 |
| rrf2 family transcriptional regulator | SDE_RS00515 | Not Available | - | 125617 - 126057 | 16343.9 |
| nnrs family protein | SDE_RS00520 | Not Available | - | 126129 - 127385 | 45026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.