Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Saccharophagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Saccharophagus |
| Species | Saccharophagus degradans |
| Strain | 2-40 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 4 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | No |
Genome Summary
Saccharophagus degradans 2-40
Accession NumberNC_007912.1
Gene Summary
Adenine Count
1369925 bp
Thymine Count
1369938 bp
Guanine Count
1157231 bp
Cytosine Count
1160437 bp
Genome Length
5057531 bp
Protein-coding Genes
4086 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative tail sheath protein | SDE_RS05450 | Not Available | + | 1326736 - 1328148 | 51675.2 |
| Putative tail tube protein 2 | SDE_RS05455 | Not Available | + | 1328196 - 1328630 | 16183.4 |
| Putative tail tube protein 2 | SDE_RS05460 | Not Available | + | 1328698 - 1329144 | 17081.3 |
| duf5908 family protein | SDE_RS22940 | Not Available | + | 1329148 - 1329309 | 5851.99 |
| cis tube protein | SDE_RS05465 | Not Available | + | 1329314 - 1329979 | 24595.0 |
| Putative baseplate hub and tail lysozyme | SDE_RS05470 | Not Available | + | 1330039 - 1331751 | 60416.7 |
| Paar repeat-containing protein | SDE_RS05475 | Not Available | + | 1331783 - 1332061 | 8575.38 |
| Baseplate wedge subunit | SDE_RS05480 | Not Available | + | 1332066 - 1332503 | 16191.3 |
| chromosomal replication initiator protein dnaa | SDE_RS00015 | Not Available | + | 389 - 1957 | 58463.6 |
| dna polymerase iii subunit beta | SDE_RS00020 | Not Available | + | 2145 - 3248 | 40737.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.