Vibrio vulnificus YJ016

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio vulnificus is a lactose-fermenting, halophilic, gram-negative, opportunistic pathogenic bacterium from the same family as those that cause cholera. It normally lives in warm seawater and is part of a group of vibrios that are called "halophilic" because they are salt requiring organisms.This organism causes wound infections, gastroenteritis, or a syndrome known as primary septicemia.Found in warm coastal waters, this bacterium is related to the cholera pathogen and can cause a severe and potentially fatal illness. Infections tend to occur through eating raw or improperly cooked shellfish, particularly oysters. The ingestion of V. vulnificus by healthy individuals can result in gastroenteritis. The "primary septicemia" form of the disease can follow.Wound infections result either from contaminating an open wound with sea water harboring the organism, or by lacerating part of the body on coral, fish, etc., followed by contamination with the organism.Persons who are immunocompromised, especially those with chronic liver disease, are more at risk from Vibrio vulnificus. There is no evidence for person-to-person transmission.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio vulnificus
StrainYJ016

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio vulnificus YJ016
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Vibrio vulnificus YJ016


Gene Summary

Adenine Count

14290 bp

Thymine Count

12425 bp

Guanine Count

10024 bp

Cytosine Count

11769 bp

Genome Length

48508 bp

Protein-coding Genes

56 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
preprotein translocase subunit secgBJE04_RS12905Not Available-2751400 - 275173211444.8
phosphoglucosamine mutaseBJE04_RS12910Not Available-2751994 - 275333447682.4
dihydropteroate synthaseBJE04_RS12915Not Available-2753363 - 275419330025.9
atp-dependent zinc metalloprotease ftshBJE04_RS12920Not Available-2754247 - 275619971680.3
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeBJE04_RS12925Not Available-2756307 - 275693623298.1
ribosome assembly rna-binding protein yhbyBJE04_RS12930Not Available+2757075 - 275737110996.7
transcription elongation factor greaBJE04_RS12935Not Available-2757444 - 275791717544.9
porinBJE04_RS12945Not Available+2758446 - 275945035967.3
serine-type d-ala-d-ala carboxypeptidaseBJE04_RS12950Not Available+2759545 - 276097552857.6
yban family proteinBJE04_RS12955Not Available+2761050 - 276146616172.4

Displaying genes 4251 – 4260 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites