Vibrio vulnificus YJ016

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio vulnificus is a lactose-fermenting, halophilic, gram-negative, opportunistic pathogenic bacterium from the same family as those that cause cholera. It normally lives in warm seawater and is part of a group of vibrios that are called "halophilic" because they are salt requiring organisms.This organism causes wound infections, gastroenteritis, or a syndrome known as primary septicemia.Found in warm coastal waters, this bacterium is related to the cholera pathogen and can cause a severe and potentially fatal illness. Infections tend to occur through eating raw or improperly cooked shellfish, particularly oysters. The ingestion of V. vulnificus by healthy individuals can result in gastroenteritis. The "primary septicemia" form of the disease can follow.Wound infections result either from contaminating an open wound with sea water harboring the organism, or by lacerating part of the body on coral, fish, etc., followed by contamination with the organism.Persons who are immunocompromised, especially those with chronic liver disease, are more at risk from Vibrio vulnificus. There is no evidence for person-to-person transmission.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio vulnificus
StrainYJ016

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio vulnificus YJ016
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Vibrio vulnificus YJ016

Accession NumberNC_005128.1

Gene Summary

Adenine Count

14290 bp

Thymine Count

12425 bp

Guanine Count

10024 bp

Cytosine Count

11769 bp

Genome Length

48508 bp

Protein-coding Genes

56 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
coniferyl aldehyde dehydrogenaseBJE04_RS18425Not Available+630855 - 63233655867.9
c-type cytochromeBJE04_RS18430Not Available-632295 - 63261511621.8
low-specificity l-threonine aldolaseBJE04_RS18435Not Available-632688 - 63369536216.4
nudix hydrolaseBJE04_RS18440Not Available-633714 - 63422919138.9
atpase rava domain-containing proteinBJE04_RS18445Not Available+634505 - 63617263267.5
atpase rava stimulator viaaBJE04_RS18450Not Available+636182 - 63762755074.1
mmcq/yjbr family dna-binding proteinBJE04_RS18455Not Available+637753 - 63809712936.4
duf962 domain-containing proteinBJE04_RS18460Not Available+638134 - 63857116716.8
lyse family translocatorBJE04_RS18465Not Available-638604 - 63922422459.7
d-ribose pyranaseBJE04_RS18470Not Available+639508 - 63992715082.0

Displaying genes 631 – 640 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites