Vibrio vulnificus YJ016

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio vulnificus is a lactose-fermenting, halophilic, gram-negative, opportunistic pathogenic bacterium from the same family as those that cause cholera. It normally lives in warm seawater and is part of a group of vibrios that are called "halophilic" because they are salt requiring organisms.This organism causes wound infections, gastroenteritis, or a syndrome known as primary septicemia.Found in warm coastal waters, this bacterium is related to the cholera pathogen and can cause a severe and potentially fatal illness. Infections tend to occur through eating raw or improperly cooked shellfish, particularly oysters. The ingestion of V. vulnificus by healthy individuals can result in gastroenteritis. The "primary septicemia" form of the disease can follow.Wound infections result either from contaminating an open wound with sea water harboring the organism, or by lacerating part of the body on coral, fish, etc., followed by contamination with the organism.Persons who are immunocompromised, especially those with chronic liver disease, are more at risk from Vibrio vulnificus. There is no evidence for person-to-person transmission.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio vulnificus
StrainYJ016

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Vibrio vulnificus YJ016
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Vibrio vulnificus YJ016

Accession NumberNC_005128.1

Gene Summary

Adenine Count

14290 bp

Thymine Count

12425 bp

Guanine Count

10024 bp

Cytosine Count

11769 bp

Genome Length

48508 bp

Protein-coding Genes

56 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nupc/nupg family nucleoside cnt transporterBJE04_RS12765Not Available-2718517 - 271977943474.9
tatd family hydrolaseBJE04_RS12770Not Available-2719985 - 272078230012.2
duf5363 family proteinBJE04_RS25070Not Available-2720769 - 27209065660.79
peptide chain release factor 3BJE04_RS12775Not Available-2721037 - 272262659226.8
ggdef domain-containing proteinBJE04_RS12780Not Available-2722759 - 272384740827.0
putative bifunctional diguanylate cyclase/phosphodiesteraseBJE04_RS12785Not Available+2724134 - 272619778030.8
ribosomal protein s18-alanine n-acetyltransferaseBJE04_RS12790Not Available-2726169 - 272662116944.2
dna polymerase iii subunit psiBJE04_RS12795Not Available-2726628 - 272702915497.8
gnat family n-acetyltransferaseBJE04_RS12800Not Available-2727171 - 272767418135.7
scp2 domain-containing proteinBJE04_RS12805Not Available-2727658 - 272818519874.0

Displaying genes 4221 – 4230 of 4831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites