Corynebacterium efficiens YS-314

Gram-positiveRodNon-motileFacultative aerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Coryneform bacteria are rod-shaped, fast growing, non-sporulating Gram-positive bacteria that enjoy widespread distribution. Corynebacteria are used commercially to produce amino acids. Since the discovery, in the 1950s, that these bacteria could produce large amounts of glutamic acid, researchers have genetically modified strains to increase their yields.Phylogenetic studies, based on 16S rDNA analysis, demonstrated that three strains formed a distinct cluster within the genus Corynebacterium, and that their nearest relatives were Corynebacterium glutamicum and Corynebacterium callunae, also known as glutamic-acid-producing species. The data from 16S rDNA sequence and DNA-DNA related studies clearly indicated that the three isolates represented a new species within the genus Corynebacterium. All of the isolates could grow at 45C and produced acid from dextrin. On the basis of this data it was proposed that the three glutamic-acid-producing isolates together be classified as Corynebacterium efficiens sp. nov.Worldwide there is a huge demand for Monosodium-glutamate (MSG) as a flavour enhancer, in 1996 worldwide production exceeded 1 million tonnes and much of it is produced using Corynebacterium. This causes a problem in that the amount of heat generated kills the bacterium unless complicated cooling systems are installed. In Japanese trials evidence has shown that C. efficiens can produce MSG at a temperature of 45C, this could result in more efficient and cheaper production. (From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium efficiens
StrainYS-314

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Corynebacterium efficiens YS-314
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Corynebacterium efficiens YS-314

Accession NumberNC_004369.1

Gene Summary

Adenine Count

579149 bp

Thymine Count

580869 bp

Guanine Count

995753 bp

Cytosine Count

991319 bp

Genome Length

3147090 bp

Protein-coding Genes

2782 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
1,2-phenylacetyl-coa epoxidase subunit paadCE_RS03485Not Available+711742 - 71228419907.5
1,2-phenylacetyl-coa epoxidase subunit paaeCE_RS03490Not Available+712284 - 71343541656.0
enoyl-coa hydratase/isomerase family proteinCE_RS03495Not Available+713513 - 71428327188.3
acetyl-coa c-acyltransferaseCE_RS03500Not Available+714361 - 71556641835.9
enoyl-coa hydratase/isomerase family proteinCE_RS03505Not Available+715611 - 71641128441.7
3-hydroxyacyl-coa dehydrogenase family proteinCE_RS03510Not Available+716427 - 71731130785.8
paai family thioesteraseCE_RS03515Not Available-717308 - 71770013849.8
phenylacetic acid degradation bifunctional protein paazCE_RS03520Not Available+717844 - 71996175730.3
homoserine o-acetyltransferaseCE_RS03525Not Available-720080 - 72121341284.5
o-acetylhomoserine/o-acetylserine sulfhydrylaseCE_RS03530Not Available-721446 - 72276246915.1

Displaying genes 781 – 790 of 2959 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

95 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da

Displaying 1–10 of 95 metabolites