Roseibium aggregatum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium aggregatum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium aggregatum

Accession NumberCXST00000000.1

Gene Summary

Adenine Count

1379432 bp

Thymine Count

1375544 bp

Guanine Count

1967935 bp

Cytosine Count

1972384 bp

Genome Length

6696127 bp

Protein-coding Genes

6153 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Virion structural proteinLAL4801_04221Not Available+4547727 - 454823618532.6
hypothetical proteinLAL4801_04222Not Available+4548236 - 454860713335.1
Virion structural proteinLAL4801_04223Not Available+4548607 - 454899913708.9
Possible peptidoglycan binding proteinLAL4801_04224Not Available+4548996 - 454940315196.9
Putative major tail structural proteinLAL4801_04225Not Available+4549431 - 455064842677.6
Tail chaperoninLAL4801_04226Not Available+4550735 - 455112714325.9
Tail tape measure proteinLAL4801_04227Not Available+4551509 - 455414590871.5
Minor tail proteinLAL4801_04228Not Available+4554145 - 455449213061.2
Minor tail proteinLAL4801_04229Not Available+4554489 - 455520226272.2
Tail assembly proteinLAL4801_04230Not Available+4555202 - 455592127120.9

Displaying genes 1 – 10 of 6015 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

367 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0010981atrochrysone carboxylateC16H13O7Not availableNot available
Average317.274Da
Monoisotopic317.066676339Da
BASm00110183-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneC13H19N2O2Chemical structure of 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethyl-2-pyrrolidin-2-oneNot available
Average235.306Da
Monoisotopic235.1441043Da
BASm0011145(3Z,5E)-dodecadienoyl-CoAC33H50N7O17P3SChemical structure of (3Z,5E)-dodecadienoyl-CoANot available
Average941.78Da
Monoisotopic941.221869666Da
BASm0011146(3Z,5E)-dodecadienoateC12H19O2Chemical structure of (3Z,5E)-dodecadienoateNot available
Average195.283Da
Monoisotopic195.139053432Da
BASm00111563-hydroxydodecanoyl-CoAC33H54N7O18P3SChemical structure of 3-hydroxydodecanoyl-CoANot available
Average961.81Da
Monoisotopic961.248084414Da
BASm0011787(S)-2-hydroxymethylglutarateC6H8O5Chemical structure of (S)-2-hydroxymethylglutarateNot available
Average160.126Da
Monoisotopic160.038270517Da
BASm0012597(6R)-10-formyltetrahydrofolateC20H21N7O7Chemical structure of (6R)-10-formyltetrahydrofolateNot available
Average471.431Da
Monoisotopic471.151343204Da

Displaying 361–367 of 367 metabolites