Alkalilimnicola ehrlichii MLHE-1

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Ectothiorhodospiraceae

Genus

Alkalilimnicola

Description

Alkalilimnicola ehrlichii MLHE-1. This chemoautotrophic strain was isolated from Mono Lake in California, which contains arsenic and has high pH and salt concentrations. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyEctothiorhodospiraceae
GenusAlkalilimnicola
SpeciesAlkalilimnicola ehrlichii
StrainMLHE

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAquatic
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalilimnicola ehrlichii MLHE-1

Accession NumberNC_008340.1

Gene Summary

Adenine Count

533858 bp

Thymine Count

529800 bp

Guanine Count

1106608 bp

Cytosine Count

1105678 bp

Genome Length

3275944 bp

Protein-coding Genes

2902 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sigma-54-dependent transcriptional regulatorMLG_RS13260Not Available-2971431 - 297280150448.6
sensor histidine kinaseMLG_RS13265Not Available-2972808 - 297499780452.3
duf4390 domain-containing proteinMLG_RS13270Not Available-2974979 - 297556922588.9
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbMLG_RS13275Not Available-2975566 - 297684947069.6
methionyl-trna formyltransferaseMLG_RS13280Not Available-2976883 - 297782733599.6
peptide deformylaseMLG_RS13285Not Available-2977824 - 297836020035.1
lysm peptidoglycan-binding domain-containing proteinMLG_RS13290Not Available+2978528 - 297954437522.8
dna-processing protein dpraMLG_RS13295Not Available+2979568 - 298070739975.8
duf494 domain-containing proteinMLG_RS13300Not Available+2980707 - 298118018221.5
dna topoisomerase iMLG_RS13305Not Available+2981243 - 298363690152.4

Displaying genes 2701 – 2710 of 2965 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

81 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da

Displaying 1–10 of 81 metabolites