Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alicycliphilus denitrificans str. BQ1
Accession NumberNKDB00000000.2
Gene Summary
Adenine Count
722073 bp
Thymine Count
727118 bp
Guanine Count
1616293 bp
Cytosine Count
1613483 bp
Genome Length
4678967 bp
Protein-coding Genes
4243 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | CE154_000970 | Not Available | + | 198051 - 198569 | 18364.9 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | CE154_000975 | Not Available | - | 198570 - 199463 | 32305.9 |
| serine/threonine protein kinase | CE154_000980 | Not Available | + | 199663 - 201507 | 65889.8 |
| 50s ribosomal protein l13 | CE154_000985 | Not Available | + | 201653 - 202081 | 15488.9 |
| 30s ribosomal protein s9 | CE154_000990 | Not Available | + | 202091 - 202483 | 14153.0 |
| iron-sulfur cluster insertion protein erpa | CE154_000995 | Not Available | + | 202916 - 203290 | 13244.4 |
| anhydro-n-acetylmuramic acid kinase | CE154_001000 | Not Available | - | 203352 - 204473 | 38473.0 |
| m23 family metallopeptidase | CE154_001005 | Not Available | - | 204489 - 205871 | 49287.3 |
| tyrosine--trna ligase | CE154_001010 | Not Available | + | 206043 - 207278 | 44960.7 |
| lysr family transcriptional regulator | CE154_001015 | Not Available | - | 207340 - 208335 | 36565.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.