Desulfotalea psychrophila LSv54

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobulbia

Order

Desulfobulbales

Family

Desulfocapsaceae

Genus

Desulfotalea

Description

Desulfotalea psychrophila is a marine Gram-negative sulfate-reducing bacterium. It was isolated from permanently cold Arctic sediments off the coast of Svalbard. Its optimal growth temperature is 10 degrees Celsius but it is also able to grow at temperatures as low as -1.8 degrees Celsius. Psychrophilic sulfate-reducing bacteria are assumed to contribute significantly to the carbon and sulfur cycles.(From http://www.expasy.org/sprot/hamap/DESPS.html) (BacMap)

Taxonomy

Kingdom	Pseudomonadati
Phylum	Thermodesulfobacteriota
Class	Desulfobulbia
Order	Desulfobulbales
Family	Desulfocapsaceae
Genus	Desulfotalea
Species	Desulfotalea psychrophila
Strain	No strain

Profile

Physiology
Gram staining properties	Negative
Shape	Rod
Mobility	Yes
Flagellar presence	Yes
Number of membranes	2

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobe
Optimal temperature	7
Temperature range	Psychrophilic
Habitat	Specialized
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	No

Genome Summary

Desulfotalea psychrophila LSv54

Accession NumberNC_006138.1

Gene Summary

Adenine Count

948745 bp

Thymine Count

925300 bp

Guanine Count

816327 bp

Cytosine Count

833011 bp

Genome Length

3523383 bp

Protein-coding Genes

3014 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

2

Genes

Name	Locus Tag	UniProt	Strand	Coordinates	Molecular Weight
(2fe-2s)-binding protein	DP_RS12820	Not Available	-	2884732 - 2885232	17818.7
fad binding domain-containing protein	DP_RS12825	Not Available	-	2885247 - 2886116	30404.9
phosphoribosylformylglycinamidine cyclo-ligase	DP_RS12830	Not Available	+	2886661 - 2887731	38207.5
Trna-asp	Not Available	Not Available	+	2888207 - 2888283	Not Available
Trna-val	Not Available	Not Available	+	2888339 - 2888414	Not Available
Trna-asp	Not Available	Not Available	+	2888435 - 2888511	Not Available
Trna-val	Not Available	Not Available	+	2888567 - 2888642	Not Available
Trna-asp	Not Available	Not Available	+	2888662 - 2888738	Not Available
Trna-val	Not Available	Not Available	+	2888794 - 2888869	Not Available
Trna-asp	Not Available	Not Available	+	2888888 - 2888964	Not Available

Displaying genes 2561 – 2570 of 3154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P		Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4		Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000377	(S)-malateC4H4O5		Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6		Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001244	2-succinylbenzoateC11H8O5		`27415-09-04`	Average220.181Da Monoisotopic220.038270517Da
BASm0001697	(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4		Not available	Average132.1146Da Monoisotopic132.042258744Da
BASm0001717	fumarateC4H2O4		Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001845	nicotinateC6H4NO2		Not available	Average122.1015Da Monoisotopic122.0242034Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da

Displaying 1–10 of 63 metabolites