Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2160 domain-containing protein | ATU_RS18130 | Not Available | - | 987992 - 988285 | 11080.8 |
| carbohydrate abc transporter permease | ATU_RS18135 | Not Available | - | 988288 - 989202 | 33673.4 |
| carbohydrate abc transporter permease | ATU_RS18140 | Not Available | - | 989206 - 990072 | 32363.1 |
| abc transporter atp-binding protein | ATU_RS18145 | Not Available | - | 990075 - 991145 | 39161.2 |
| abc transporter atp-binding protein | ATU_RS18150 | Not Available | - | 991160 - 992230 | 39231.3 |
| glycerol-3-phosphate dehydrogenase | ATU_RS18155 | Not Available | - | 992268 - 993791 | 56297.3 |
| deor/glpr family dna-binding transcription regulator | ATU_RS18160 | Not Available | - | 993899 - 994672 | 27722.2 |
| siroheme synthase cysg | ATU_RS18165 | Not Available | - | 994814 - 996280 | 52699.4 |
| nitrate reductase | ATU_RS18170 | Not Available | - | 996252 - 998900 | 95148.7 |
| nitrite reductase small subunit nird | ATU_RS18175 | Not Available | - | 999115 - 999450 | 11915.4 |
Pathways
525 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism
Proline Metabolism
Proline Metabolism
