Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATU_RS16885 | Not Available | - | 689286 - 689651 | 13027.8 |
| 30s ribosomal protein s21 | ATU_RS16890 | Not Available | - | 689890 - 690120 | 9083.37 |
| hypothetical protein | ATU_RS26640 | Not Available | - | 690379 - 691422 | 39348.8 |
| gad-like domain-containing protein | ATU_RS16900 | Not Available | - | 691507 - 692238 | 27808.1 |
| polymorphic toxin type 15 domain-containing protein | ATU_RS16905 | Not Available | - | 692241 - 693821 | 56666.9 |
| duf2169 family type vi secretion system accessory protein | ATU_RS16910 | Not Available | - | 693818 - 694927 | 41681.6 |
| type vi secretion system tip protein tssi/vgrg | ATU_RS16915 | Not Available | - | 694941 - 697205 | 81768.3 |
| hypothetical protein | ATU_RS16920 | Not Available | + | 697335 - 698270 | 35274.7 |
| hypothetical protein | ATU_RS16925 | Not Available | - | 699476 - 699769 | 11012.1 |
| is21 family transposase | ATU_RS16930 | Not Available | + | 700669 - 701241 | 21101.6 |
Pathways
6 pathways
Virulence Pathway (virH operon activation)
Virulence Pathway (virH operon activation)
Virulence (virC operon activation)
Virulence (virC operon activation)
Virulence (virD operon activation)
Virulence (virD operon activation)
Phenylalanine Metabolism
Phenylalanine Metabolism
Virulence (virE operon activation)
Virulence (virE operon activation)
Virulence (virB operon activation)
Virulence (virB operon activation)
