Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | ATU_RS12815 | Not Available | - | 2617048 - 2617695 | 23345.2 |
| mapeg family protein | ATU_RS12820 | Not Available | - | 2617707 - 2618120 | 14942.8 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | ATU_RS12825 | Not Available | - | 2618190 - 2619422 | 42688.6 |
| 2-oxoglutarate dehydrogenase e1 component | ATU_RS12830 | Not Available | - | 2619476 - 2622472 | 112246.0 |
| succinate--coa ligase subunit alpha | ATU_RS12835 | Not Available | - | 2622648 - 2623550 | 31127.8 |
| adp-forming succinate--coa ligase subunit beta | ATU_RS12840 | Not Available | - | 2623568 - 2624761 | 41901.6 |
| malate dehydrogenase | ATU_RS12845 | Not Available | - | 2624795 - 2625757 | 33539.0 |
| cell division protein zape | ATU_RS12850 | Not Available | - | 2625936 - 2627099 | 43232.4 |
| protease inhibitor inh/omp19 family protein | ATU_RS12855 | Not Available | - | 2627192 - 2627734 | 18413.5 |
| succinate dehydrogenase iron-sulfur subunit | ATU_RS12860 | Not Available | - | 2627940 - 2628719 | 29564.6 |
Pathways
6 pathways
Virulence Pathway (virH operon activation)
Virulence Pathway (virH operon activation)
Virulence (virC operon activation)
Virulence (virC operon activation)
Virulence (virD operon activation)
Virulence (virD operon activation)
Phenylalanine Metabolism
Phenylalanine Metabolism
Virulence (virE operon activation)
Virulence (virE operon activation)
Virulence (virB operon activation)
Virulence (virB operon activation)
