Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | ATU_RS10605 | Not Available | + | 2142088 - 2143392 | 48036.1 |
| mate family efflux transporter | ATU_RS10610 | Not Available | - | 2143463 - 2144860 | 49728.6 |
| methyl-accepting chemotaxis protein | ATU_RS10615 | Not Available | + | 2145191 - 2147281 | 74015.6 |
| duf2938 domain-containing protein | ATU_RS10620 | Not Available | + | 2147577 - 2148056 | 17520.8 |
| neutral zinc metallopeptidase | ATU_RS10625 | Not Available | - | 2148098 - 2149015 | 33101.6 |
| duf2306 domain-containing protein | ATU_RS10630 | Not Available | - | 2149114 - 2149602 | 17995.7 |
| lyttr family dna-binding domain-containing protein | ATU_RS10635 | Not Available | + | 2149695 - 2150516 | 30381.4 |
| carbamoyl-phosphate synthase large subunit | ATU_RS10640 | Not Available | + | 2150672 - 2154160 | 125927.0 |
| hypothetical protein | ATU_RS10645 | Not Available | + | 2154370 - 2154558 | 6716.2 |
| ggdef domain-containing protein | ATU_RS10650 | Not Available | - | 2154605 - 2155744 | 40599.4 |
Pathways
6 pathways
Virulence Pathway (virH operon activation)
Virulence Pathway (virH operon activation)
Virulence (virC operon activation)
Virulence (virC operon activation)
Virulence (virD operon activation)
Virulence (virD operon activation)
Phenylalanine Metabolism
Phenylalanine Metabolism
Virulence (virE operon activation)
Virulence (virE operon activation)
Virulence (virB operon activation)
Virulence (virB operon activation)
