Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein | ATU_RS06565 | Not Available | - | 1318206 - 1318694 | 16740.1 |
| type ii 3-dehydroquinate dehydratase | ATU_RS06570 | Not Available | - | 1318720 - 1319157 | 15603.8 |
| dsba family protein | ATU_RS06575 | Not Available | - | 1319283 - 1320050 | 27735.2 |
| pyridoxal phosphate-dependent aminotransferase | ATU_RS06580 | Not Available | + | 1320224 - 1321381 | 41740.0 |
| arsr/smtb family transcription factor | ATU_RS06585 | Not Available | - | 1321409 - 1322092 | 24263.1 |
| nipsnap family protein | ATU_RS06590 | Not Available | + | 1322167 - 1322493 | 12371.5 |
| antibiotic biosynthesis monooxygenase family protein | ATU_RS06595 | Not Available | + | 1322490 - 1322855 | 13699.2 |
| sdr family oxidoreductase | ATU_RS06600 | Not Available | + | 1322983 - 1323687 | 24767.5 |
| rne/rng family ribonuclease | ATU_RS06605 | Not Available | - | 1323801 - 1326734 | 107673.0 |
| hypothetical protein | ATU_RS26535 | Not Available | - | 1326994 - 1327134 | 5049.2 |
Pathways
525 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism
Proline Metabolism
Proline Metabolism
