Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ATU_RS15090 | Not Available | - | 286142 - 287017 | 31643.8 |
| abc transporter permease | ATU_RS15095 | Not Available | - | 287017 - 287958 | 33926.8 |
| abc transporter substrate-binding protein | ATU_RS15100 | Not Available | - | 288288 - 289814 | 55682.2 |
| glycosyltransferase family 4 protein | ATU_RS15105 | Not Available | + | 290253 - 291377 | 42217.7 |
| polysaccharide biosynthesis/export family protein | ATU_RS15110 | Not Available | + | 291854 - 293050 | 42557.7 |
| efflux rnd transporter periplasmic adaptor subunit | ATU_RS15115 | Not Available | + | 293317 - 294594 | 44909.6 |
| efflux rnd transporter permease subunit | ATU_RS15120 | Not Available | + | 294591 - 297731 | 111460.0 |
| Tmrna,resume consensus sequence (at 216): tatagccgccgaaggaca | Not Available | Not Available | + | 296632 - 297008 | Not Available |
| invasion associated locus b family protein | ATU_RS15125 | Not Available | - | 297728 - 298306 | 20322.7 |
| autotransporter domain-containing protein | ATU_RS15130 | Not Available | - | 298306 - 302280 | 130349.0 |
Pathways
6 pathways
Virulence Pathway (virH operon activation)
Virulence Pathway (virH operon activation)
Virulence (virC operon activation)
Virulence (virC operon activation)
Virulence (virD operon activation)
Virulence (virD operon activation)
Phenylalanine Metabolism
Phenylalanine Metabolism
Virulence (virE operon activation)
Virulence (virE operon activation)
Virulence (virB operon activation)
Virulence (virB operon activation)
