Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium fabrum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium fabrum str. C58
Accession NumberNC_003063.2
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATU_RS21090 | Not Available | + | 1643642 - 1643887 | 9063.32 |
| nickel/cobalt transporter | ATU_RS21095 | Not Available | - | 1643968 - 1645017 | 36165.0 |
| duf1007 family protein | ATU_RS21100 | Not Available | - | 1645011 - 1645652 | 23759.2 |
| mfs transporter | ATU_RS21105 | Not Available | + | 1645901 - 1647082 | 41371.7 |
| wd40 repeat domain-containing protein | ATU_RS21110 | Not Available | - | 1647295 - 1648287 | 34859.9 |
| cobw family gtp-binding protein | ATU_RS21115 | Not Available | - | 1648772 - 1649899 | 42041.4 |
| creatininase family protein | ATU_RS21120 | Not Available | - | 1650015 - 1650815 | 28894.5 |
| marr family winged helix-turn-helix transcriptional regulator | ATU_RS21125 | Not Available | + | 1650895 - 1651404 | 18050.5 |
| laci family dna-binding transcriptional regulator | ATU_RS21130 | Not Available | + | 1651537 - 1652559 | 36636.0 |
| 2-hydroxyacid dehydrogenase | ATU_RS21135 | Not Available | + | 1653012 - 1653974 | 34137.4 |
Pathways
525 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism
Proline Metabolism
Proline Metabolism
