Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas yabuuchiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas yabuuchiae str. NS355
Accession NumberLDTF00000000.1
Gene Summary
Adenine Count
663589 bp
Thymine Count
666134 bp
Guanine Count
1290823 bp
Cytosine Count
1288618 bp
Genome Length
3909164 bp
Protein-coding Genes
3411 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmn reductase | NS355_15900 | Not Available | + | 3483861 - 3484451 | 20659.4 |
| thymidylate kinase | NS355_15905 | Not Available | - | 3484852 - 3485523 | 24066.5 |
| chorismate mutase | NS355_15910 | Not Available | - | 3485523 - 3485801 | 10602.6 |
| farnesyltranstransferase | NS355_15915 | Not Available | + | 3485911 - 3486921 | 36088.4 |
| atp-dependent helicase | NS355_15920 | Not Available | + | 3487119 - 3489569 | 86601.4 |
| etc complex subunit i | NS355_15925 | Not Available | + | 3489582 - 3489863 | 10698.6 |
| nudix hydrolase | NS355_15930 | Not Available | - | 3490273 - 3490791 | 18460.2 |
| hypothetical protein | NS355_15935 | Not Available | - | 3490803 - 3491468 | 23682.0 |
| methanol dehydrogenase | NS355_15940 | Not Available | - | 3491470 - 3492345 | 30321.1 |
| membrane protein | NS355_15945 | Not Available | - | 3492374 - 3492967 | 21034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.