Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri
Accession NumberQSUC00000000.1
Gene Summary
Adenine Count
1005461 bp
Thymine Count
978514 bp
Guanine Count
797611 bp
Cytosine Count
830321 bp
Genome Length
3612475 bp
Protein-coding Genes
2829 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DWW35_12545 | Not Available | - | 3007700 - 3008038 | 13365.4 |
| had family phosphatase | DWW35_12550 | Not Available | - | 3008112 - 3008714 | 23789.4 |
| fecr family protein | DWW35_12555 | Not Available | - | 3008835 - 3009845 | 38326.7 |
| rna polymerase sigma-70 factor | DWW35_12560 | Not Available | - | 3009887 - 3010444 | 21963.9 |
| ribonuclease h | DWW35_12565 | Not Available | - | 3010557 - 3011030 | 17679.3 |
| arginine--trna ligase | DWW35_12570 | Not Available | - | 3011184 - 3013004 | 68534.1 |
| rhamnogalacturonan lyase | DWW35_12575 | Not Available | + | 3013353 - 3015974 | 95318.2 |
| hypothetical protein | DWW35_12580 | Not Available | - | 3016125 - 3016316 | 6905.02 |
| response regulator | DWW35_12585 | Not Available | - | 3016657 - 3020784 | 157043.0 |
| tonb-dependent receptor | DWW35_12590 | Not Available | + | 3021005 - 3024280 | 120481.0 |
Pathways
174 pathways
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Octanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation (Butanoate)
Fatty Acid Oxidation
Fatty Acid Oxidation
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Myristate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Steareate)
Fatty Acid Oxidation (Laurate)
Fatty Acid Oxidation (Laurate)
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism