Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | KT2440 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Pseudomonas putida KT2440
Accession NumberAE015451
Gene Summary
Adenine Count
1186490 bp
Thymine Count
1192046 bp
Guanine Count
1913391 bp
Cytosine Count
1889946 bp
Genome Length
6181873 bp
Protein-coding Genes
5440048 genes
Non-Coding Genes
741825 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein pqqe | PP_RS01990 | Q88QV8 | - | 456620 - 457750 | 42509.9 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | PP_RS01995 | Q88QV7 | - | 457752 - 458027 | 10314.2 |
| pyrroloquinoline-quinone synthase pqqc | PP_RS02000 | Q88QV6 | - | 458024 - 458779 | 29076.5 |
| pyrroloquinoline quinone biosynthesis protein pqqb | PP_RS02005 | Q88QV5 | - | 458943 - 459854 | 33332.9 |
| pyrroloquinoline quinone precursor peptide pqqa | PP_RS02010 | Not Available | - | 459933 - 460004 | 2811.41 |
| pyrroloquinoline quinone biosynthesis protein pqqf | PP_RS02015 | Q88QV3 | - | 460164 - 462464 | 84247.2 |
| carbon-nitrogen hydrolase family protein | PP_RS02020 | P55176 | - | 462605 - 463399 | 29313.1 |
| nad(p)/fad-dependent oxidoreductase | PP_RS02025 | P06617 | - | 463414 - 465096 | 62396.0 |
| lrp/asnc family transcriptional regulator | PP_RS02030 | Q9V0Y9 | - | 465350 - 465811 | 16692.1 |
| serine acetyltransferase | PP_RS02035 | Not Available | + | 465999 - 466553 | 20820.7 |
Pathways
10 pathways
EuMP
EuMP
Integration of EuMP pathway
Integration of EuMP pathway
L-Arabinose Degradation I
L-Arabinose Degradation I
Glutathione Metabolism
Glutathione Metabolism
Peptidoglycan Biosynthesis
Peptidoglycan Biosynthesis
Arginine Metabolism
Arginine Metabolism
Vitamin B6 Metabolism
Vitamin B6 Metabolism
TCA Cycle
TCA Cycle


