Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Samsonia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Samsonia |
| Species | Samsonia erythrinae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Samsonia erythrinae str. DSM 16730
Accession NumberSMBY00000000.1
Gene Summary
Adenine Count
909199 bp
Thymine Count
918874 bp
Guanine Count
1038655 bp
Cytosine Count
1012183 bp
Genome Length
3879021 bp
Protein-coding Genes
3424 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| minor fimbrial subunit | EDC54_10941 | Not Available | + | 2996675 - 2997175 | 17179.3 |
| minor fimbrial subunit | EDC54_10942 | Not Available | + | 2997195 - 2998124 | 32453.6 |
| eal domain-containing protein (putative c-di-gmp-specific phosphodiesterase class i) | EDC54_10943 | Not Available | + | 2998111 - 2999574 | 55132.9 |
| putative purr-regulated permease perm | EDC54_10944 | Not Available | - | 2999716 - 3000906 | 43193.8 |
| grpb-like predicted nucleotidyltransferase (upf0157 family) | EDC54_10945 | Not Available | - | 3000979 - 3001479 | 18417.0 |
| l-lactate dehydrogenase (cytochrome) | EDC54_10946 | Not Available | - | 3001593 - 3002753 | 41678.6 |
| lactaldehyde dehydrogenase | EDC54_10947 | Not Available | - | 3002952 - 3004391 | 51930.4 |
| putative membrane protein (glpm family) | EDC54_10948 | Not Available | + | 3004681 - 3005022 | 12639.0 |
| pectinesterase | EDC54_10949 | Not Available | + | 3005051 - 3006247 | 44630.3 |
| luxr family quorum-sensing system transcriptional regulator expr | EDC54_10950 | Not Available | + | 3006565 - 3007293 | 27924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.