Bifidobacterium scardovii str. LMG 21589

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium scardovii strain LMG 21589 is a Gram-positive, facultative anaerobic bacterium. As a member of the Bifidobacterium genus, this microorganism exhibits characteristic traits associated with its phylogenetic group, including its ability to ferment carbohydrates, which contributes to its ecological niche in various environments, particularly in the gastrointestinal tract of mammals. The facultative anaerobic nature of Bifidobacterium scardovii allows it to thrive in both oxygen-rich and oxygen-poor conditions, providing it with metabolic flexibility that may enhance its survivability and colonization efficiency in diverse habitats. This adaptability is particularly significant in the gut microbiome, where fluctuating oxygen levels can occur due to various physiological and dietary factors. Further studies on Bifidobacterium scardovii strain LMG 21589 could elucidate its role in the gut microbiota and its potential contributions to host health, particularly in the context of gut homeostasis and metabolic processes. Understanding its specific interactions within the microbiome could provide insights into its ecological importance and potential applications in probiotic development or gut health management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium scardovii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium scardovii str. LMG 21589

Accession NumberJGZO00000000.1

Gene Summary

Adenine Count

557714 bp

Thymine Count

553379 bp

Guanine Count

1006240 bp

Cytosine Count

1024441 bp

Genome Length

3141793 bp

Protein-coding Genes

2403 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+743647 - 743658Not Available
Minor tail proteinBSCA_0995Not Available-754551 - 75568742219.5
Minor tail proteinBSCA_0996Not Available-755693 - 75644227590.7
Putative tape measure proteinBSCA_0997Not Available-756452 - 759760116081.0
Tail assembly chaperoneBSCA_0998Not Available-759783 - 76014813528.1
Hypothetical proteinBSCA_0999Not Available-760193 - 76052512433.6
Major tail subunitBSCA_1000Not Available-760607 - 7608889038.52
Major tail proteinBSCA_1001Not Available-760860 - 76149523657.3
hypothetical proteinBSCA_1002Not Available-761523 - 76191514197.9
hypothetical proteinBSCA_1003Not Available-761915 - 76225612411.0

Displaying genes 1 – 10 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

241 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002026acrylateC3H3O2Chemical structure of acrylate10344-93-1
Average71.056Da
Monoisotopic71.013852917Da
BASm0002197D-arabinoseC5H10O5Chemical structure of D-arabinoseNot available
Average150.1299Da
Monoisotopic150.05282343Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 241 metabolites