Caulobacter vibrioides str. T5M6

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Caulobacter

Description

Caulobacter vibrioides str. T5M6 is a Gram-negative, rod-shaped bacterium that predominantly exists as single cells. This microorganism thrives in aquatic environments, demonstrating an optimal growth temperature of 35.0°C and requiring oxygen for aerobic respiration. C. vibrioides species are characterized by their distinctive life cycle, which includes a polar flagellum and the formation of a stalked cell that allows for attachment to surfaces in aquatic habitats. This adaptation is significant for survival and nutrient acquisition in varied environments. The ability of C. vibrioides str. T5M6 to thrive under aerobic conditions may influence its ecological role, particularly in nutrient cycling within aquatic ecosystems. The presence of this strain in freshwater or marine environments could provide insights into the dynamics of microbial communities, especially regarding its potential interactions with other microorganisms and its role in biofilm formation. The understanding of C. vibrioides str. T5M6’s life cycle and environmental preferences may contribute to broader studies on microbial ecology and the functional diversity of aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusCaulobacter
SpeciesCaulobacter vibrioides
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Caulobacter vibrioides str. T5M6
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caulobacter vibrioides str. T5M6

Accession NumberLNIY00000000.1

Gene Summary

Adenine Count

812121 bp

Thymine Count

816834 bp

Guanine Count

1843606 bp

Cytosine Count

1849616 bp

Genome Length

5322177 bp

Protein-coding Genes

4642 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+19 - 133Not Available
23s ribosomal rnaNot AvailableNot Available+233 - 3022Not Available
tat pathway signal sequence domain proteinAS593_06480O31530-139 - 2919101940.0
16s ribosomal rnaNot AvailableNot Available+3620 - 5109Not Available
aminotransferaseAS593_06485P96847-3034 - 417941021.1
aminoacyl-trna deacylaseAS593_06490P37174+4271 - 474416129.6
Ncrna_class:rnase_p_rnaNot AvailableNot Available+5301 - 5682Not Available
hypothetical proteinAS593_06495Not Available-4860 - 553123756.8
pp_00005AS593_06500Not Available-5599 - 6660Not Available
integraseAS593_06505Not Available+6745 - 780339898.7

Displaying genes 1 – 10 of 3456 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

256 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001795pentanoateC5H9O2Chemical structure of pentanoateNot available
Average101.126Da
Monoisotopic101.0608031Da
BASm0001797tetracosanoateC24H47O2Chemical structure of tetracosanoateNot available
Average367.6288Da
Monoisotopic367.357605748Da
BASm0001842(5Z,8Z,11Z,14Z)-eicosatetraenoateC20H31O2Chemical structure of (5Z,8Z,11Z,14Z)-eicosatetraenoateNot available
Average303.467Da
Monoisotopic303.2329538Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002041L-galactoseC6H12O6Chemical structure of L-galactoseNot available
Average180.156Da
Monoisotopic180.0633881Da

Displaying 41–50 of 256 metabolites